Old scientists never clean out their refrigerators

Blogging on Peer-Reviewed Research

We all know the story of the Miller-Urey experiment. In 1953, a young graduate student named Stanley Miller ran an off-the-wall experiment: he ran water, methane, ammonia, and hydrogen in a sealed flask with a pair of electrodes to produce a spark, and from those simple building blocks discovered that more complex compounds, such as amino acids, were spontaneously produced. Stanley Miller died in 2007, and in going through his effects, the original apparatus was discovered, and in addition, several small sealed vials containing the sludge produced in the original experiment were also found.

This isn’t too surprising. I’ve gone through a few old scientists’ labs, and you’d be surprised at all the antiquities they preserved, all with notes documenting exactly what they are. It’s habit to keep this stuff.

Now the cool part, though: the scientists who unearthed the old samples ran them through modern analysis techniques, which are a bit more sensitive than the tools they had in the 1950s. In 1953, Miller reported the recovery of five amino acids from his experiment. The reanalysis found twenty two amino acids and five amines in the vials. He was more successful than he knew!

i-fd77777a341fb3ccad00b07dda6d2e80-miller.jpg
Moles (relative to glycine = 1) of the various amino acids
detected in the volcanic apparatus vials. Amino acids underlined have not been previously
reported in spark discharge experiments. Values for amines are minimum values because of loss due to their volatility during workup.

Yes, I know that Miller’s reducing atmosphere is no longer considered to be an accurate representation of the ancient earth’s atmosphere. However, the experiment still supported a key idea: that the synthesis of these organic compounds did not require any kind of guiding hand, but would naturally emerge from unassisted chemical reactions. Furthermore, the authors of this paper argue that while it was not a good model of the global atmosphere, it might still model local conditions in isolated areas.

Geoscientists today doubt that the primitive atmosphere had the highly reducing composition Miller used. However, the volcanic apparatus experiment suggests that, even if the overall atmosphere was not reducing, localized prebiotic synthesis could have been effective. Reduced gases and lightning associated with volcanic eruptions in hot spots or island arc-type systems could have been prevalent on the early Earth before extensive continents formed. In these volcanic plumes, HCN, aldehydes, and ketones may have been produced, which, after washing out of the atmosphere, could have become involved in the synthesis of organic molecules. Amino acids formed in volcanic island systems could have accumulated in tidal areas, where they could be polymerized by carbonyl sulfide, a simple volcanic gas that has been shown to form peptides under mild conditions.

So good work, Dr Miller!


Johnson AP, Cleaves HJ, Dworkin JP, Glavin DP, Lazcano A, Bada JL (2008) The Miller Volcanic Spark Discharge Experiment. Science 322(5900):404.

Drinking Liberally in Morris!

After a long hiatus, we’re having a Drinking Liberally event at 7 tonight, at Old #1. I guess we’re optimistically revitalized by the Democratic prospects for November.

Actually, it’s also because Robin, of WOMB blog, Power Liberal, and the Minnesota Independent is passing through, so we have to show her that Morris is much more exciting than the boring old Minneapolis/St Paul metropolitan area. So come on down, locals!

I’m sure he’s relieved — the devil has all the good lawyers locked up

I reported before that Nebraska state senator Ernie Chambers was suing god for committing evil and making terroristic threats. I’m sorry to say now that God beat the rap, and now has something in common with O.J. Simpson. Of course, he got off on a technicality.

“Given that this court finds that there can never be service effectuated on the named defendant this action will be dismissed with prejudice,” Judge Polk wrote in his ruling.

So just because god is really good at hiding, or nonexistent, nobody can sue him? I think the judge should have at least issued a standing order for his arrest in case he ever does show up.

Abortion ship sails to Spain

Here’s an interesting idea: since some countries have restrictive laws on abortion (rather like the ones McCain apparently would like to institute, where even the health of the mother becomes a non-excuse), a Dutch non-profit is sending a ship to provide reproductive health services to such countries, anchoring in international waters to get around local policies. It’s a brilliant idea — a way to directly help women deprived of rational family planning opportunities by the wackaloons of their government.

Just one problem: how are they going to help South Dakota?

Bidlack for Congress

That guy Phil is complaining that none of the big sites like Daily Kos or Crooks & Liars are covering the political campaign of Hal Bidlack for the 5th Congressional District of Colorado. Hey, Phil! Is that an admission that your site is tiny and insignificant? Cover it yourself!

At least I’ll offer my support. I met Hal at The Amazing Meeting, and he’s a good guy — a skeptic and rationalist who ought to be in congress. I hope you eligible Coloradans give him your vote!

Post-debate

McCain really annoyed me last night, and there are a few things I have to mention now.

First of all, his gripe about the $3 million “overhead projector” simply marks him as an idiot — and not just an ignorant idiot, but the kind of idiot who ignores readily available evidence. What he is dismissing is a tool for science education. Take a look at what the sky projector looks like — your teacher didn’t have one of those babies to flash her transparencies up in the classroom. And while you’re there, you can always donate to the Adler Planetarium. The other thing McCain leaves out of his complaint is that the projector was not funded, and they’re still hurting for a replacement.

The other trumped-up lie and pseudo-scandal that irritates me is the ACORN mess. ACORN is an organization that works to help the poor, which of course makes it about as anti-Republican as you can get. They have had some incidents of attempted fraud, but the fraud was against ACORN itself, with workers attempting to cheat to get paid for submitting falsified registrations. Furthermore, it was ACORN itself that caught these fake registrations and notified government agencies.

What the ACORN nonsense is all about is a preemptive attempt by the Republican party to cast doubt on the election. I predict we’ll hear much more about this if Obama wins…while the Diebold bias will be ignored, and the unfair policy of using the most unreliable voting machines in the poorest districts will continue.

Oh, no! Another debate!

It’s been a long day for me, and now I get to cap it off with another presidential debate. This could be awful. I’m just hoping that McCain is feeling desperate and will do something that’s bug-eyed crazy to change the status of the election. Go ahead, say what you think in the comments.


McCain brought up the “overhead projector” again! He really is an anti-science loon.


After claiming that Obama was running a negative campaign, McCain than tried to defend the ugly attempt to tar Obama by association with Ayers. Hypocrite alert!


My final opinion: McCain didn’t blow up as I hoped, making it a somewhat boring debate. Instead, McCain spent the whole hour and a half being creepy — I don’t want another president who makes me want to gag every time his face appears on TV.

McCain also seemed to lie incessantly. The claim that Obama has been negatively campaigning coming out of 100%-negative-McCain was a low point for him. I don’t trust him a bit.