Local Boy Gets Obnoxious

Cool — I’ve been written up in the Seattle Post-Intelligencer. It’s a good story by a journalist, Tom Paulson, who I just met this week, and who seems to know what’s up in the area. I’ve already had a relative call up and say she’s glad I’m famous, so it’s all just in time for the family reunion tomorrow — everyone will be prepared to take me down a peg and make sure I’m not too cocky.

Since I did say a few things about the Discovery Institute, he called them up and got their side of the story. This part is the typical creationist sidestep.

Not so, said John West, associate director of the institute’s center for science and culture. Intelligent design allows for the possibility of some kind of ultimate intelligence behind everything, West said, but their research “doesn’t start from a religious premise.” He rejected Myers’ contention that they are “creationists.”

West noted that one of their scientists, Douglas Axe at the affiliated Biologic Institute in Redmond, just this week had an article describing his computer simulation of protein evolution published in the prestigious online science journal, the Public Library of Science.

“We’re not proposing the book of Genesis as a scientific textbook,” West said. “We just think science and religion are friends, not enemies.”

Where to start?

ID doesn’t just allow for the “possibility” of an ultimate intelligence, it is their fundamental premise. Read the very first sentence of the Wedge document: “The proposition that human beings are created in the image of God is one of the bedrock principles on which Western civilization was built.” It declares that their goal is the “overthrow of materialism” and that they want to re-open the “case for a broadly theistic understanding of nature.”

They are insulting our intelligence when they claim that they are not creationists. Of course they are. You have to be blind, stupid, or a dishonest scoundrel to say otherwise.

I never claimed that they were using the book of Genesis as a scientific textbook; however, their base, the people who are going rah-rah and trying to use ID as an angle to sneak their ideology in the public schools, would like nothing less. ID is a façade of pseudo-secularism erected to cloak the religious goals of their organization. If you followed the Dover trial exposed that plainly; there’s a reason we laugh and call these bozos “cdesign proponentsists“.

And of course West would bring up the recent PLoS paper — it’s an excellent example of their new attempts to patch up their secular cloak.

The paper is called Stylus: A System for Evolutionary Experimentation Based on a Protein/Proteome Model with Non-Arbitrary Functional Constraints. It’s a description of a new software package written by the secret Biologic Institute, which they argue will have utility in modeling protein evolution. The paper says absolutely nothing about Intelligent Design, makes no arguments against evolution, and is utterly untroubling to evolutionary theory, and it’s clear that the way they got it published was by studiously avoiding the kinds of stupid statements that are the hallmark of the Discovery Institute. It’s useful cover for them: they will now be announcing at every opportunity that they do too do science, and they deserve a cookie … hoping that the luster of a publication that does not address their core assertions at all can be redirected to put a little shine on the tawdry crap they advance elsewhere.

It’s actually not a bad paper, with an interesting idea at its center. They have designed an evolution simulator built on an analogy, that protein shape can be compared to the shape of Chinese characters. The virtue of the plan is that they can associate a complex morphology with an unambiguous functional criterion, its similarity to a representation in the vector world of of a Han character. It’s a clever idea, but the paper really doesn’t do anything with it yet, except propose it and make arguments for some similarities with natural processes. OK. Now if only I could trust the authors not to twist it in bizarre directions in the future, knowing that few of their critics will have bothered to plumb the arcana of their software, or that they know that all they have to do is claim that they’ve got some observation that disproves some facet of evolution, which will require that some people be distracted from real biology to address it.

Wesley already has some criticisms. I haven’t read it carefully enough to offer my own (I’m on vacation, dangit!), but I do have some general doubts…and suspect that if it works well at emulating biology, it won’t be supporting the scientific claims of Intelligent Design creationists, anyway. But no matter its successes, it is already being used by the Discovery Institute as a political tool to prop up their sham operation.

A good question

Sometimes my email contains a few good and sincere questions — and here’s an example. This is probably the most common rock on which creationists founder: a profound misconception about what evolution says, and a natural human desire to see a guiding plan to the world.

I’m tormented.

I appreciate the struggle many creationists are having about evolutionary science. I find myself tormented as I observe the world around me.

What I seem to be focused on is how a plant or animal is self aware of it’s need to evolve? How does a tree know how to “evolve” it’s seed to fly on the wind? How would a lizard “know” that it needed to develop camouflage to survive?

I can’t imagine who any plant or animal other than human would have the ability to “know” and as well as pass it along via DNA to future hundreds of thousands of generations?

I’d appreciate your feedback…this is really starting to bother me.

The first part of the answer is that the organism doesn’t know that it must evolve. There is no plan, no guidance, no goal imposed ahead of time, the tree or lizard are not following a program that says they have a goal. The outcome emerges as a consequence of selection and chance.

The tree did not plan ahead. In a population of trees, there was chance variation in how far seeds fell from the parent; seeds that fell in the shade of the parent would not flourish, while seeds that were fortuitously caught by the wind and fell further away were more likely to thrive, and produce more offspring. Lizards that blended in with their environment were less likely to be eaten, and had more offspring that, inheriting their parents inconspicuousness, were also less likely to be eaten, and variation in their progeny was selected further approximations to camouflage.

There is no “know”, no awareness. Darwin’s insight was that life didn’t need it to produce a pattern of change — unguided random variation, filtered after the fact by natural selection, produces an appearance of design.

And yes, this is a fact that many people find troubling. We’re brought up thinking we’re cuddled in the swaddling hands of a god who has a grand plan for us all, and that every little up and down in our life is the product of some cosmic intent — it’s reassuring and makes us feel important. It’s an interpretation unsupported by any evidence, too, and often contradicted. We live in a world of chance, and we’re all on our own.

OK, readers, maybe you have a better explanation. Go ahead, chime in with a comment and explain how we’re going to wean the general public away from their imaginary sky father.

Do not be concerned

Several people have written to me expressing their concern over the recent publication of this paper:

Evidence for Intelligent Design in Gastrointestinal Endocrinology: Identification of Novel Cholecystokinin/Gastrin-Like Peptides in the Nematode Caenorhabditis elegans.
Greeley GH Jr, Endocrinology. 2008 Jun;149(6):3184-6.

Oh, no! Have the creationists scored a coup and snuck propaganda into a legitimate science journal? Have no fear. This is a short review paper by an editor describing some work on cholecystokinin phylogeny. Some of you old-school physiology types may recall that a colloquial term for this class of hormones is “brain-gut peptides” — molecules that are expressed in both the gut and the central nervous system (and many other places). CCK is produced in the endocrine cells of the upper small intestine and in neurons in the brain, apparently prompting a weak joke linking intelligence and gastrointestinal hormones. It is not pro-ID at all. It even says, “the work of Janssen and
co-workers elegantly defends the hypothesis that the mammalian CCK/gastrin-CCK1R/2R signaling system is an ancient signaling system with counterparts throughout the evolutionary tree.”

Turn off the sirens and return to your homes. All is well. It’s just another false positive in the literature for Intelligent Design.

Support El Tinklenberg!

Michele Bachmann is the Minnesota representative who embarrasses us all. She is, of course, a Republican, and one of the dumber ones — she’s our anti-gay, anti-science, anti-American, far-right-wing kook, and we need to get her out of office … she’s up for re-election this year.

My oldest son Alaric is an activist and organizer for the Democrat-Farmer-Labor party here in Minnesota, and he’s campaigning for the sensible opposition, El Tinklenberg. He’s asked me to promote an event going on TONIGHT, a fundraiser and rally for Tinklenberg in St Cloud. If you’re somewhere in the region, stop by. If maybe you aren’t a Minnesotan, but you’d like to help out financially (really — Bachmann is flaming insane, and the entire country ought to be interested in ousting her), call 320 217 5394 and chip in a few bucks (you might also find my boy on the other end of the phone line. Tell him hello from me.)

Here are the details on the big event.

Please Help Us
DEFEAT
Michele Bachmann

Cindy Harner, Rich Kelly
and
Rick Miller

Invite You to Come, Meet and Support

El Tinklenberg
Candidate for Congress in the 6th

Thursday, June 5
7:00 – 9:00 PM

Home of Rich Kelly:
524 7th Avenue South, St. Cloud
Co-hosts include:
Senator Tarryl Clark
Representative Larry Haws
Representative Larry Hosch
Candidate Joanne Dorsher
Candidate Rob Jacobs

Contribute What You Can!

ALL ARE WELCOME!

RSVP to Rick Miller 320-293-3935 rick@tinklenberg08.com

Work fast. I just got this notice myself, since my connection to the internet is only intermittent while I’m out of town.

Another dumb poll

It’s part of an article about an atheist billboard for the Greater Philadelphia Coalition of Reason, which sounds great. Alas, the Inquirer marred it with a stupid internet poll that asks, “Do you believe in God?” Haven’t they learned yet that these things are easily skewed? Go show them that atheists can be organized, too.

Take a look at the comments while you’re there, too — I like the one that says, “If this guy ever gets diagnosed with terminal cancer I guarantee he takes that billboard down so fast your head will spin.” It’s an admission that religion is built on fear.

Atheists should have some manners, at least

OK, this is a little rude, a bit funny, and a lot sacrilegious. I’m all for sacrilege, though, so I can’t condemn it too much.

Authorities were alerted after a parishoner heard “rustling and groaning” coming from inside the confession box and pulled back the curtains to reveal a goth-rock couple engaged in oral sex, ANSA said.

The agency said the pair — a 31-year-old laborer and a 32-year-old teacher — defended their conduct saying: “We are atheists and for us, having sex in church is like doing it any other place.”

Well, yes, but they are also human beings who live within a society which imposes some restrictions on your behavior — they shouldn’t be having sex in a time and place where the activities of others will be disturbed. You shouldn’t have sex in a confessional unless you can arrange it for a time when others will not be trying to use it, or when others will not be distracted by the growls and screams. And please, be courteous and clean up thoroughly after yourself. Leave the confessional as clean as you found it.

And look, if you aren’t discreet you’ll discombobulate some old celibate prude, and that’s not nice.

However, Bishop Antonio Lanfranchi of Cesena-Sarsina took said the couple’s behavior was “an outrage of notable proportions which bespeaks unutterable squalor.”

He added that a special ceremony would be held to purify the confession box.

What, bleach? You don’t need a useless ceremony, just a competent custodian.

It’s all rather futile. I suspect many confessionals have been used in such a profane and earthy manner, along with church balconies, graveyards, pulpits, pews, and let’s not even speculate about the possibilities with rosary beads.