Now for something totally different. I’m gearing up for a project in which I track the developmental progression of pigmentation in juvenile spiders, and along the way, also map out variation in that pigment. Analyzing all that will require a fair amount of data; I’ll have to do a daily collection of pigmentation images for a single cohort of spiders, and organize those for analysis. I have a poor idea of how much time that will take, so I did a speedrun this morning. I lined up 6 containers of juvenile spiders (all S. triangulosa from the same clutch, plus one S. borealis of roughly the same age), and racked them up for fast photography. I gave myself 30 seconds per spider to get a photo series, which turned out to be easily done, the fastest part of the whole process.
Then I took all the images and made a focus stack, which took a while but since it was all automated was fairly painless. Then I rotated all the images to the same orientation, anterior upwards. First glitch: some of the spiders were annoying and presented a side view to me, rather than the dorsal view I wanted. I went with it anyways; the only way to get them to oblige is to catch them in repose in the appropriate position, so that’s going to take a couple of trials to get right. Next, everything was scaled to the same size.
Data collection: a few minutes. Processing the images: over an hour. I think I’ll be able to automate some of the processing, though, which ought to simplify and speed it up. The end result is a series of standardized images of 6 spiders in which I can see the dorsal pigmentation fairly well, although two of them were not compliant about lying in an optimal position.