Carnivalia, and an open thread

Hey, not many carnival announcements this week. You know, if you’ve got a carnival that is in some way related to science, biology, godlessness, academia — my usual obsessions — feel free to send me notices and I’ll mention them in my weekly carnival roundup.

The Tangled Bank

Next week’s Tangled Bank will be at Epigenetics News. send your science links in to me or host@tangledbank.net before 9 May.

This is an open thread. Go to it!

Woo hoo III!

Knocked another one down — I finished the grades for the last exam in my genetics course (there is still an optional final next Friday). This was an important one, because I promised myself that if I could get them all done this afternoon, I would let myself go to the local theater to watch Spiderman 3 tonight. Those little internal incentives help a lot!

We have the brains of worms

Way back in the early 19th century, Geoffroy St. Hilaire argued for a radical idea, that vertebrates and most invertebrates were inverted copies of each other. Vertebrates have a dorsal nerve cord and ventral heart, while an insect has a ventral nerve cord and dorsal heart. Could it be that there was a common plan, and that one difference is simply that one is upside down relative to the other? It was an interesting idea, but it didn’t hold up at the time; critics could just enumerate the multitude of differences observable between arthropods and vertebrates and drown out an apparent similarity in a flood of documented differences. Picking out a few superficial similarities and proposing that something just looks like it ought to be so is not a persuasive argument in science.

Something has changed in the almost 200 years since Geoffroy made his suggestion, though: there has been a new flood of molecular data that shows that Geoffroy was right. We’re finding that all animals seem to use the same early molecular signals to define the orientation of the body axis, and that the dorsal-ventral axis is defined by a molecule in the Bmp (Bone Morphogenetic Protein) family. In vertebrates, Bmp is high in concentration along the ventral side of the embryo, opposite the developing nervous system. In arthropods, Bmp (the homolog in insects is called decapentaplegic, or dpp) is high on the dorsal side, which is still opposite the nervous system. At this point, the question of whether the dorsal-ventral axis of the vertebrate and invertebrate body plans have a common origin and whether one is inverted relative to the other has been settled, and the answer is yes.

[Read more…]

Hard to disbelieve

Tomorrow is 5 May, and I mentioned in my
review of A Brief History of Disbelief that this excellent documentary on atheism/agnosticism was supposed to be aired on PBS stations all across the country around this time. It’s been hard to track down, though; I’ve looked in my local TV listings, and there’s no mention. Readers have contacted their stations directly, and some have reported back that they will be seeing it, while others have found that their stations are not carrying it. It’s very confusing.

Well, a reader found a grid listing all of the airdates and stations that will be showing A Brief History of Disbelief. If you’re in San Diego or Philadelphia, it’s well covered; otherwise, it’s scattered very sparsely on the map. It is not being shown in Minnesota.

Rock star?

Larry Moran has already mentioned this recent article in Cell on this strange new fad of science blogging. He was interviewed along with many others of us, including me. I don’t know about this bit:

The rock star of scientist bloggers is Paul Myers, an associate professor of biology at the University of Minnesota, who writes Pharyngula. With about 20,000 visitors per day, Pharyngula is currently the most popular science blog according to Technorati. Myers started writing about 4 years ago. “It was a casual decision. One summer I had some free time and started typing away. And people started coming to the site,” he recalls. “I thought that I would stop in a month or so but I didn’t. I find it useful for communicating with other scientists and the community.” Myers not only writes about his brand of science, developmental biology, but often discusses politics and religion. “The blog would not be as popular if it was only about science,” he says. “I am popularizing science using political issues as a hook.”

This just isn’t good enough. I need to know which rock star. The Roger Waters of the blogosphere would be cool. David Bowie would be nifty, too, although I’m not thin enough. The Keith Richards of science blogging would be troubling … but if I’m the Ozzie, I’m hanging it up.

Go ahead and talk about the Republican debate

I don’t want to talk about it — I despise the whole field — but everyone is emailing me about it, and I was even talking to my mother on the phone tonight and she asked me about it (I said I wouldn’t watch those weasels unless they were in a crotch-kicking contest). I’ll let this thread open up for a free-for-all discussion of the cacophony.

All I’ve heard so far is that a) they avoided talking about Bush, preferring to measure themselves against Reagan (Reagan was almost as great an incompetent as the current resident, so they’re obviously aiming low), and b) when they were asked about evolution, a goodly subset of them were so stupid that they said they didn’t believe it. Too bad this debate wasn’t merged with that quiz show, so some stern harridan could have announced, “You are the weakest link!” and pulled a lever that would have catapulted them into a shark tank or something entertaining.

So who are the Republican anti-science goons? Huckabee, Brownback, and … ?


Watch the response at Crooks and Liars. The foolish three are Huckabee, Brownback, and Tancredo.

Kevin Padian explains macroevolution

The gang at the NCSE have put together Padian’s testimony at the Dover trial with the slides he used. You may have already read the transcript, but with the figures added it acquires a whole new dimension — it’s basically a wonderfully done primer in the basics of macroevolutionary biology. Next time some creationist tries to simper at you that he accepts microevolution, but that there’s no evidence for macroevolution and he refuses to believe it, point him at this page. It’s aimed not at scientists, but at the judges and lawyers at a trial, so it’s eminently comprehensible to any intelligent layman … and it crushes the bogus rejection of macroevolution that they are so fond of using.