Inventing excuses for a Bible story, and getting them published in a science journal?

I sometimes teach a course in scientific writing, in which we instruct students in the basics of writing a paper: citing the literature, the conventions of the standard science paper (introduction, methods, results, discussion), all that sort of thing. We also discuss research topics and coming up with a reasonable rationale for doing the work, and “the instructor told me to do it” or “I like turtles” isn’t adequate — that one of the results of researching a topic should be the discovery of genuine problems that warrant deeper analysis. A science paper is a story, and it always begins with a good question.

I think I’m going to need to add another bad rationale to my list: “I like the Bible” isn’t justification for research. Although, I notice, there are a lot of people in the bureaucracy of science who don’t see it as an obstacle to funding or publishing research built on that premise.

A bad paper has been published in PLoS One. It’s competently executed within its narrow scope, as near as I can tell, but its premise is simply to reach for more pretense of a scientific basis for biblical fairy tales by an old earth creationist. It should have been rejected for asking an imaginary question and answering it with a fantasy scenario.

One summary catches the gist of the ‘research’.

The study is intended to present a possible scenario of events that are said to have taken place more than 3,000 years ago, although experts are uncertain whether they actually occurred.

Yeah, it’s a Christian using a computer simulation to try and justify the story of the parting of the Red Sea by Moses. And it’s pointless. If you read the paper, you’ll learn that under certain very specific conditions involving making up a bit of Middle Eastern topography, a strong wind can push shallow bodies of water sufficiently to temporarily exposed the floor. Woo hoo, I say, unenthusiastically. This is an utterly trivial result, and the paper doesn’t seem to have anything of general use to say.

The paper itself is a weird combination of transparency and disingenuousness. The title and the introduction are all about the dynamics of wind setdown, this phenomenon in which wind pressure can cause a drop in water level, but then throughout, the author describes the work exclusively in terms of explaining “a possible hydrodynamic explanation for Moses crossing the Red Sea”. And the author is also very open about declaring his interests:

Competing interests: The lead author has a web site, theistic-evolution.com, that addresses Christian faith and biological evolution. The Red Sea crossing is mentioned there briefly. The present study treats the Exodus 14 narrative as an interesting and ancient story of uncertain origin.

It’s a simple exercise in post-hoc rationalization of an unfounded event in a myth, gussied up as if it were science. It isn’t. It’s an invention of no utility, the kind of fantasy world-building that looks goofy even in fiction; and it’s going to be abused by religious nuts to argue that their superstitions are genuine.

It doesn’t even make sense from the perspective of a believer. So one of the great miracles of the Bible is being reduced to a meteorological fluke with an entirely natural explanation? It makes bible stories compatible with science by making the supernatural elements of the story completely irrelevant, which is nice if you’re an atheist, but only if you’re an atheist who is very gullible and willing to accept other elaborate prior premises.

It’s also troubling that this work actually got funded by NCAR and the Office of Naval Research. Why? I suspect that sympathetic Christians somewhere in the administration gave bad Christian research a pass that they wouldn’t have if, for instance, someone proposed doing simulations to determine the meteorological conditions that could loft a horse and Mohammed into the air, or exactly what confluence of geology and atmospheric effects could lead to the illusion of Thor tossing thunderbolts from a cloud.

And how is this garbage getting published in PLoS One? If a paper like this were plopped on my desk for review, I’d be calling the editor to ask if it was a joke. If it wasn’t, I’d laugh and reject it — there is no scientific question of any significance being addressed anywhere in the work. Is this representative of the direction PLoS is going to be taking, with low standards for acceptance and what had to have been nonexistent review?

A suggestion for Mr Drews, the author, who sounds like he is a software developer affiliated with a research institution: you aren’t a scientist, stop pretending to be one. I’ll also say the same thing I tell every creationist pseudoscientist who tries to resolve their mythical stories with unconvincing handwaving about science: it doesn’t work. We see right through you. Bad, overstretched technical justifications for miraculous events are even less persuasive than simply declaring “My omnipotent god did it with magic”.

SoCalians: you have a date for Saturday

The Institute for Creation Research has a “museum”, and they’re having an open house on Saturday, 25 September, from 9-5. I think it would be lovely if smart, science-minded people were to crash the event, either to politely protest outside of it, or quietly enter and offer rational commentary on the exhibits — your choice.

Here’s the address:

Creation and Earth History “Museum”
10946 Woodside Ave
Santee, CA

Send me accounts and pictures if you go!

Stupidity has a toll

California has had zero deaths from whooping cough in the last 55 years.

The toll this year: 9 babies dead of whooping cough. So far.

There is something about that link above that makes me angry. The source given for the terrible statistic is the Huffington Post — a site which has done far more than its share to promulgate lies and fear about vaccination, and which should bear a portion of the guilt for those dead children.

We teach developmental biology at UMM

I’m back to teaching developmental biology this term, and one of the things I do in my upper level classes is have students write blog entries on the themes of the course. In the past, I’ve given them space right here to do that, which I’ve found to be a parlous course of action — the commentariat here is savage and brutal, and infested with trollish nitwits who can derail threads spectacularly, so I’m doing it a little differently this time around. I’ve had them create their very own blogs on their own spaces, which has the additional benefit that maybe they can keep them going after they graduate.

So here’s the list of student blogs from my course. Feel free to visit, criticize, comment, etc., but do remember that they’re just now learning, so constructive discussion is far better than our usual ravaging ferocity. They’ve also been warned to be thick-skinned, though, so you don’t have to be too gentle.

Developmental Biology blogs

There isn’t much there yet in most cases, since they’ve just set them up, but I’ll be making weekly links to relevant articles in the future.

While I’m at it, I’ll mention that a former student, Levi Simonson, has a blog from his perspective as an ex-UMM student, now a graduate student at the wonderful University of Oregon. People do leave here to go on to interesting work!

The Otis Redding excuse

Tristero thinks he has refuted my denial of the existence of souls by citing Otis Redding’s soul, but I reject his refutation! He has done it by the sneaky tactic of a strategic redefinition of “soul”, away from ‘magic essence of personal identity independent of the material substrate of the brain’ to ‘smokin” hot passionate musicality’, and I must call shenanigans. Shenanigans, I say!

I could be refuted, however, if Redding’s soul were to possess my body and set me to crooning “These arms of mine” down the hallway right now.

Actually, there are many moments when it would be useful to be possessed by Otis Redding. He never does.

TimeTree

People are always asking me for the source of those nice t-shirts that illustrate how long we’ve diverged from a given species. I think the name must be hard to remember: they’re at evogeneao.com. Now there’s a little software widget that will be just as neat-o.

Look up TimeTree, and remember to show it to the kids. This is a page with a simple premise: type in the name of two taxa (it will accept common names, but may give you a list of scientific names to narrow the search), and then it looks them up in the public gene databases and gives you a best estimate of how long ago their last common ancestor lived.

Grasshoppers and I, for instance, shared a many-times-great grandpa 981 million years ago. My zebrafish and I are practically cousins, with our last shared ancestor living a mere 454 million years ago. Hey, tree, we’ve been apart for 1407 million years, how’s it going? Sparrow! Long time no see! 325 million years, huh?

You get the idea. It’s great for getting the big perspective. The kids will pester you all the time for dates. Especially since…it’s got an iPhone app! Get on the App Store on your smart phone or iPad and search for TimeTree — it’s totally free (except for the cost of owning such a gadget, of course).

Oh, and once you’re done entertaining the children and yourself, it’s actually a serious tool. Tap on the results and it’ll take you to all the scientific details: breakdown of mitochondrial vs. nuclear date estimates, source papers, all that sort of thing.

For details on how it works, there’s also a published paper:

Hedges SB, Dudley J, Kumar S (2006) TimeTree: a public knowledge-base of divergence times among organisms. Bioinformatics 22(23):2971-2972.

Look, a cat! 92 million years.

What the Republicans really want

All you have to do is look at their official state party platforms. The platforms are typically wish lists forged at multiple levels: I’ve been involved a little bit with our local Minnesota DFL, and anyone can show up and propose an addition to the party platform, which means you’ve usually got a few pie-in-the-sky items suggested…and those all get voted on at the local convention and then at the state convention, and the wackier or excessively improbable items get winnowed away in the voting. If you look at the Minnesota DFL platform, for instance, you find a rather idealistic document that gives you an idea of what the Democratic electorate wants to do. It’s not entirely practical (“We oppose terrorism” isn’t exactly breaking news), but it’s at least representative of a liberal/progressive party, and I’m not at all embarrassed to be part of that political party.

Look at the Texas Republican platform, and you see something different: they’re for God and guns, and against gays and Darwin. It seems to be a nationwide theme for Republicans. The Montana Republican platform is in the news because it actually endorses something entirely illegal.

At a time when gays have been gaining victories across the country, the Republican Party in Montana still wants to make homosexuality illegal.

The party adopted an official platform in June that keeps a long-held position in support of making homosexual acts illegal, a policy adopted after the Montana Supreme Court struck down such laws in 1997.

Like I said, party platforms often aren’t practical guidelines for specific legislative action, but they do reflect the will of that segment of the electorate. The heartening part of this news, though, is that at least some Republicans are embarrassed by their own party platform. Now if only the ones who favor such medieval nonsense would split off and join a new party (Teabaggers!) and let the Republicans equilibrate back to something slightly more sensible.

(via Kobra)