Mighty Huntress

I learned something today! There is this spider I keep on my office desk. I’ve always wondered, since these spiders are so passive and patient, and I’m feeding them wingless Drosophila, do they just wait until one stumbles into their web, or do they ever actively hunt? The answer is…they’ll hunt when opportunity arises.

So this spider has webs strung across this wooden frame, and she tends to hang out near the top of one of the sticks.

This afternoon I watched her abruptly descend on a drag line from her perch to the gravelly scree directly below to drop on a fruit fly walking by, bite to kill, and wrap it in silk before hauling it right back to her starting point. It was spectacular!

In case you’re squeamish about this sort of thing, I’ve put a closeup of the proud hunter below the fold.

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Playing games, again

The minecraft server, Sitosis, has generated a brand-spanking new map, and is accepting membership requests, so it’s time to play again this weekend, only this time with friends. Log in on Sunday, 9 August at noon Central time.

Let’s do a livestream while playing as a group on Sitosis! Follow the instructions here if you aren’t already signed up: http://mc.sitosis.com/#join.

We’ll just jump on the map, everyone meet at spawn, and we’ll figure out what to do next. Go exploring? Help someone build? Monster hunting? Sit around and eat cake? Talk about the science of Minecraft genetics and spiders?

We’ll all fumble about for the entertainment of any watchers!

People have asked about voice chat. Yes, Freethoughtblogs has a discord server! We can use that for voice chat during the session.

This is why I don’t talk to mammals anymore

It’s also why I avoid grocery stores. Jon Rosenberg recounts a perfectly ordinary encounter at the supermarket.

I am not a talking asparagus, but this kind of thing is going on all over the place.

By the way, another reason I shun the local grocery store is because, despite the state-wide mask mandate, the management of that filthy pesthole still allows customers to stroll around maskless. And they do.

The Great Filter of American media

It is the 5th of August, and I have noticed that I’ve already run out of access to ‘free’ articles on various newspapers around the country. I like to check in on the Seattle Times now and then, since that’s my hometown paper, but I’m remote enough that I don’t think it’s worth subscribing…which means that if something happens there at any time in the month other than the first few days of the first week, I’m not getting it from a local source. I think I almost certainly have a few free articles left in the NY Times, but that’s because I despise that paper and only get anything from them when I am surprised by an unlabeled link.

I’m in a privileged position with respect to science articles, since I have access to institutional subscriptions through my university, but even there there are a lot of journals I can’t read. We’ve also got the Elsevier problem, where one greedy publisher buys up rights to a few essential journals and then only lets libraries subscribe if they buy a package that includes a lot of drecky bad journals.

Nathan Robinson has seen the situation clearly: The Truth Is Paywalled But The Lies Are Free.

But let us also notice something: the New York Times, the New Yorker, the Washington Post, the New Republic, New York, Harper’s, the New York Review of Books, the Financial Times, and the London Times all have paywalls. Breitbart, Fox News, the Daily Wire, the Federalist, the Washington Examiner, InfoWars: free! You want “Portland Protesters Burn Bibles, American Flags In The Streets,” “The Moral Case Against Mask Mandates And Other COVID Restrictions,” or an article suggesting the National Institutes of Health has admitted 5G phones cause coronavirus—they’re yours. You want the detailed Times reports on neo-Nazis infiltrating German institutions, the reasons contact tracing is failing in U.S. states, or the Trump administration’s undercutting of the USPS’s effectiveness—well, if you’ve clicked around the website a bit you’ll run straight into the paywall. This doesn’t mean the paywall shouldn’t be there. But it does mean that it costs time and money to access a lot of true and important information, while a lot of bullshit is completely free.

Then we wonder why the public is so poorly educated on current events and science. I am particularly appalled that we tax everyone twice on science: once to do the state funded research, which we then immediately turn over to for-profit publishers, who then demand that the public pay them, the middlemen, to read the results. They’ve even got scientists hoodwinked into doing all the reviewing of papers for free, and often into paying to have their own work published.

Siblings wrecked my sleep last night

I had an intense dream where I was at a family reunion, and everyone was there, including my dead father and dead sister, and weirdly, they’d aged an additional 20 or 30 years as if I’d been totally mistaken about attending their funerals, and they’d been just living their lives while I was oblivious and unaware. Then my baby sister Lisa, who died in her 30s but was now a gray-haired and healthy 52, took offense at my joy at seeing her again and started punching me, battered me to the ground, and was kicking me to death. My father, who was also looking strong, glanced my way and said, “You deserve it”, and then all my brothers and sisters joined in.

That’s when I woke up, totally bewildered by what is going on in my brain. I got to lie there for a few hours wondering what sick guilt was lurking deep in the rotting core of my mind, and what it was trying to tell me, and wondering why I was such a horrible person. Now I’ve got a lot of work to do today, and this worry is going to prey on me all day long. Is there an oneirologist in the house?

It’s strange to be living on an alien planet

At least, that’s how I feel when I read an article on Midwestern politics in Harper’s.

In January, I sublet my studio apartment in Los Angeles, flew to O’Hare, rented a purring silver Audi A4 from an unmarked garage miles from the airport (this was somehow the cheapest option), and headed north to begin my winter in a little lakefront house. The night after the Packers game the weather warmed up slightly, and I went for a long walk along the crashing shore.

We are so barbarous that the big national publications need to fly in a journalist to cover the exotic perspectives of Kenosha, Wisconsin. Put him in a comfortable lake house with a nice car and let him make forays into wilderness of bars and cafes, like an anthropologist among the cheeseheads, and have him take notes on his interactions, which he then synthesizes into a grand thesis on why the middle class of the Midwest voted for Donald Trump.

You will be happy to know his answer fits comfortably into the extant ethnographic literature — it’s all about economic anxiety, you know, and the word “race” is only used in the context of the Democratic vs. Republican horserace, and there are more quotes from Grover Norquist than there are from black folk. The only black person mentioned, we are told, was a former drug dealer, while the author seems more interested in a cranky old white man who drives away customers in a bar by insisting that the television be tuned to Tucker Carlson. When you focus on the stuff you’re comfortable with, that you understand will fit your narrative best, it’s no wonder the story you send back is so lacking in insight. It’s not that I disagree with his conclusion, but that he could have sat in his office, enjoying his view of a tangle of freeways, and written it without making the dangerous voyage to a savage Wisconsin winter wilderness.

Still, the Democrats’ strategy might work out this November. Trump’s response to the pandemic and the protests has been so wanton and self-serving that enough Americans might be convinced to vote for a candidate offering steadiness. But tacking toward the middle will do nothing to sway the Kenoshans I met, among the many Americans who have decided that voting changes very little, and that both parties are more beholden to the elite than to ordinary citizens.

In the long run, a Democratic Party that wants to govern is going to have to respond to this feeling, not by offering incremental reforms in policing, or tweaks to existing health care laws, but by beginning a real transformation. It will require new structures—we have not yet tried to govern a metropolis without a police force, but we soon might—as well as a recommitment to things that the Democrats have abandoned, like organized labor. It will take admitting that the morass we’ve ended up in was not created by accident. It will take naming the people who brought us to this point, and it will take a willingness to confront them and to make enemies—something Republicans have long been happy to do. It will, finally, take a political project that can match the feeling of participation and excitement that the Trump movement has offered. Democrats picked a candidate who has promised to return the country to normal. That may end up being the most dangerous choice of all.

Yes? The Democrats will have to gather their courage and actually fight for things that matter to people in Wisconsin — and California and New York — in order to earn their votes and get them involved. But, you know, the lesson here is that the Trump campaign didn’t do any of that, yet somehow got the people of our benighted hinterlands, as well as Orange County, to vote for him. I still don’t know how to combat outrageous demagoguery with the bland vaguenesses that Harper’s offers us.

ENCODE is back, and Larry Moran is on it

The ENCODE project is a massive international program to get papers in Nature, and as Larry notes is better described as a publicity campaign than a research project. Every couple of years they pop up with another paper with sensational, but unfounded, claims — in 2012, for instance, they claimed that 80% of the genome was functional, using a wobbly and useless definition of “functional”, and the creationists loved it. They still fling that claim in my eye every time I engage them.

But this time around they’ve dialed the hype-meter down, which is good, I guess. It does mean the paper is dry as dust and not particularly interesting, with nothing but description.

Both of these publicity campaigns, and the published conclusions, were heavily criticized for not understanding the distinction between fortuitous transcription and real genes and for not understanding the difference between fortuitous binding sites and functional binding sites. Hundreds of knowledgeable scientists pointed out that it was ridiculous for ENCODE researchers to claim that most of the human genome is functional based on their data. They also pointed out that ENCODE researchers ignored most of the evidence supporting junk DNA.

ENCODE 3 has just been published and the hype has been toned down considerably. Take a look at the main publicity article just published by Nature (ENCODE 3). The Nature article mentions ENCODE 1 and ENCODE 2 but it conveniently ignores the fact that Nature heavily promoted the demise of junk DNA back in 2007 and 2012. The emphasis now is not on how much of the genome is functional—the main goal of ENCODE—but on how much data has been generated and how many papers have been published. You can read the entire article and not see any mention of previous ENCODE/Nature claims. In fact, they don’t even tell you how many genes ENCODE found or how many functional regulatory sites were detected.

In summary,

The ENCODE Consortium seems to have learned only two things in 2012. They learned that it’s better to avoid mentioning how much of the genome is functional in order to avoid controversy and criticism and they learned that it’s best to ignore any of their previous claims for the same reason. This is not how science is supposed to work but the ENCODE Consortium has never been good at showing us how science is supposed to work.

What it is is good public relations. Gotta keep the money flowing in and papers flowing out, you know.

BethAnn McLaughlin is now famous, in a bad way

Once upon a time, when I first heard about BethAnn McLaughlin, I posted approvingly about her. She was a founder of #MeTooSTEM, and she was struggling to get tenure at Vanderbilt, but it was held up by “allegations that she had posted anonymous, derogatory tweets about colleagues” — those accusations were made by someone being investigated for sexual harassment. It seemed like she was fighting a righteous battle.

Later it turns out that McLaughlin abused her positions as leader of #MeTooSTEM to bully and harass. Large numbers of people resigned rather than work with her.

I still followed her on Twitter, but with reservations. There was something askew there.

Then, recently, one surge of news on that medium was the death from COVID-19 of @sciencing_bi, a Hopi bisexual scientist. Something seemed off about it, though, in part because McLaughlin was promoting the story hard, and in larger part because it was drama entirely on Twitter — there were no corroborating news stories, no obits, no press releases from @sciencing_bi’s university. It felt like a bubble floating entirely in the virtual world of the Twitterverse, which was odd, given that this was the kind of tragedy that would at least have students begging local papers to tell the story.

Now the bubble has popped. @Sciencing_Bi has been revealed to be a sockpuppet of BethAnn McLaughlin.

As the questions swirled, the account settings were switched to private. Then late on Sunday, Twitter suspended both McLaughlin’s and the @Sciencing_Bi accounts.

“We’re aware of this activity and have suspended these accounts for violating our spam and platform manipulation policies,” a Twitter spokesperson told BuzzFeed News by email. The company declined to comment on whether it had any forensic evidence linking the two accounts to the same device or person.

A spokesperson from ASU told BuzzFeed News they had no record of any faculty matching @Sciencing_Bi’s description. And other parts of @Sciencing_Bi’s accounts did not match up: The university closed its campus in March, switching to online instruction, and did not implement salary cuts.

It was truly a sockpuppet, in the traditional sense of the term — @Sciencing_Bi was created to support McLaughlin, and donations sent to @Sciencing_Bi to assist in their struggle with chronic disease went to…McLaughlin.

The @Sciencing_Bi account was created in October 2016 and frequently mentioned McLaughlin. Over the past couple of years, with McLaughlin facing mounting criticism after MeTooSTEM volunteers left the organization complaining of mistreatment and a lack of transparency, @Sciencing_Bi had supported McLaughlin in these disputes.

Recall that one of the accusations that halted McLaughlin’s progress towards tenure at Vanderbilt was that she had posted anonymous accusations against other faculty. That begins to fit her standard MO now, as someone who takes advantage of anonymous online narratives to build an imaginary claque. Worst of all, though, she did deep harm to real causes while flailing about for attention.

As @Sciencing_Bi’s narrative seemed to fall apart, scientists reacted with outrage that someone would fabricate a persona who was a COVID-19 patient, an Indigenous person, and a victim of sexual harassment.

“This faking being Native has a long history of being tied to the actual theft of resources and land,” Kim TallBear of the University of Alberta in Canada, who studies the engagement of Indigenous people with science and technology, told BuzzFeed News. “The fact that this woman thought she could get away with this tells you how little she understands about the actual state of affairs for Native people in the United States.”

“I am disgusted that anyone would take advantage of persistent sexism, racism, homophobia, the genocide of Indigenous peoples, and COVID fears for their own personal gain,” Jacquelyn Gill, a paleoecologist at the University of Maine, told BuzzFeed News. “This is a person that did harm to very real movements and people.”

The terrible thing is that BethAnn McLaughlin will be back, under a new pseudonym, trying to recover the attention she formerly held while poisoning the discourse with lies yet again. These people always creep back. It’s what they do.

But look! Right now she’s in Science, and Heavy, and The Daily Beast! That counts for something, I guess. McLaughlin has gained notoriety at the expense of social justice.

“My real concern, though,” Gill added, “is that someone leveraged racism, sexism, homophobia, and COVID fears for their own personal gain. Any time someone fakes a marginalized identity, it provides fuel for people who don’t want social justice movements to succeed.”

Oh boy, it’s a vertigo day!

This getting old thing sucks. I’ve got things to do in the lab, but when I stood up this morning to walk in, woo hoo, the world was wobbling and spinning and doing all those fun things that prove to my mind that the universe really does rotate around me, and it does so really fast and rather chaotically.

Fortunately, I have some pills from the last time this happened to me, so my plan for the day has changed to sitting motionless and not turning my head too fast. Exciting. Oh, and if the rest of you could all stop whirling around me, that would help too.

It all cleared up within a day last time, and the previous case was a lot more severe, so I’m planning to be stable again soon. Now if I could just get this computer screen to stop swimming off to the left for a little while…

Let’s call a buffoon a buffoon

It must be nice to be filthy rich, so that you can say any idiotic thing and automatically get lots of attention, a good part of it your defenders rushing to make excuses for your idiocy. Witness Elon Musk.

He’s been proving himself a fool over and over again, yet still there are people who still insist that he’s a genius, rather than a walking, talking demonstration that incompetence can easily float to the top in a capitalist society.

I notice that Egyptians have responded to that stupid remark with deference and respectful disagreement. Politeness doesn’t work any more, and maybe it never worked. How about if we start changing that, beginning with a wealthy capitalist exploiter?