Ruse vs. Fuller

The latest issue of Science has a deservedly cruel review of Steve Fuller’s dreary philosophical assault on evolution, Dissent over Descent: Intelligent Design’s Challenge to Darwinism. I could tell from the title alone that the book was going to be worthless—Intelligent Design creationism provides no coherent “challenge” to evolution other than the purblind relabeling of it as “Darwinism”—but poor Michael Ruse had to actually read the whole book. Here’s his quick summary of the contents:

More amused than cross, let me go to the heart of Fuller’s case against Darwinian evolutionary theory and for IDT—for his is as much a negative critique of the opposition as a positive defense of his own beliefs. Fuller feels that Charles Darwin failed to make the case for his mechanism of natural selection. Darwin did not give a cause for evolution. He certainly did not unify the field. At most he gave lists of facts. Moreover, today if we feel that advance has been made, it is primarily in the molecular field, and this owes little or nothing to traditional evolutionary thought. At best Darwinism is a kind of tarted-up natural theology and, this being so, why not IDT?

Well. If that is an accurate description, and I have no reason to think otherwise since I have read some of Fuller’s pronouncements on these topics and they are entirely in line with the summary, then Fuller is an even bigger fool than I thought. Those statements are wrong in every case. Not just wrong, but transparently wrong, since even a non-philosopher like myself can read The Origin and see that his accusations against Darwin’s argument are false, and as someone who follows the field of molecular evolution somewhat closely, I think his claims about the state of the modern biological sciences are utterly silly.

Fortunately, Ruse has concisely skewered Fuller’s arguments for us.

The important thing is that all of this is completely wrong and is backed by no sound scholarship whatsoever. In at least one case, Fuller makes his case by an egregious misreading—of something I wrote about the role of genetic drift in Sewall Wright’s shifting balance theory. For the record, Charles Darwin set out to provide a cause, what he called—following his mentors like William Whewell (who in turn referred back to Newton)—a true cause or vera causa. Darwin felt, and historians and philosophers of science as well as practicing evolutionary biologists still feel, that he succeeded, for two reasons. First, he showed how organisms can be changed by human picking or selecting. Although Fuller repeatedly claims that Darwin intended no analogy here, that is simply not true. In the face of virtually everybody—including Alfred Russel Wallace, who (in the manuscript he sent to Darwin in 1858) explicitly denied a link between artificial and natural selection—Darwin insisted that we can gain confidence about selection in nature from what happens when humans are active. Second, Darwin brought everything together in a “consilience of inductions.” He argued that if you take selection as the causal mechanism, then you can explain instinct, the fossil record, geographical distributions of organisms, anatomy, systematics, and embryology. In turn, the success of these explanations feeds back to support the belief in selection. About as unifying a setup as it is possible to imagine.

One can go on to look at things today. It is ludicrous to claim that modern evolutionary biology is not integrated with molecular biology. Motoo Kimura’s neutral theory depends crucially on the claim that selection has little or no effect on processes down at the molecular level. Genetic fingerprinting has proved absolutely vital for observational and experimental studies of evolution. Someone like British ornithologist Nicholas Davies, working out the relationships among individual dunnocks (Prunella modularis), would have been powerless without the technique. And in evolutionary developmental biology (evo-devo), currently the hottest area of evolutionary research, how does one speak of genetic homologies between fruitflies and humans without talking about molecules?

Somehow, Fuller has been granted the status of an authority by Intelligent Design creationists. I don’t know how or why, but I hope they keep picking buffoons to represent their cause.


Ruse M (2008) A Challenge Standing on Shaky Clay. Science 322(5898):47-48.

Pray for a poll to turn out the way they want it

How can I resist this poll? It’s on a site called Pray for McCain-Palin, which is hilarious in itself, and here’s the poll on that page:

Senator McCain’s Pick of Sarah Palin as Vice Presidential Running Mate

Solidified my vote for him: 66%
Didn’t change my vote for him: 5%
Made me less likely to vote for him: 4%
Didn’t change my vote against him: 1%
Solidified my vote against him: 25%

Prayer won’t help you now, Jebusites. The Pharynguloid hordes are coming.

Physics is important to us biologists, too

The Canadian Undergraduate Physics Conference is in trouble — government support has been flat, and corporate support has been declining. They are really in trouble: here’s what I got from one of the people working on it:

The CUPC is the largest conference in North America organized entirely by undergraduate students. It brings together students from across Canada and the world studying a vast array of subject areas from mathematical and theoretical physics to medical biophysics to engineering and applied physics. This important event gives many students their first experience with academics outside of the classroom, and helps to cultivate an interest in research and higher study. I, and every one else working on the organization of this event, would therefore be extremely grateful if you would be willing to post a link to your blog for the conference (http://cupc.ca/) and ask for donations (which are accepted on the site). The conference is in only a few short days and we are desperate for funds. If the we cannot find adequate support, this will be the 44th and final CUPC, which will be a tremendous shame for science education.

If you can, donate. If you know any potential sponsors who care about undergraduate physics research, pass the word on.

Fossil daisy-chain

Blogging on Peer-Reviewed Research

Here’s a very strange fossil from the Chengjiang Lagerstätte, an early Cambrian fossil bed from 525 million years ago. It’s a collection of Waptia-like arthropods, nothing unusual there; these are ancient creatures that look rather like headless shrimp. What’s weird about it is the way the individuals are locked together in a daisy chain, with the telson (tail piece) of each individual stuck into the carapace of the animal behind. It’s not just a fluke, either — they have 22 fossil chains, and just one animal all by its lonesome.

i-099b6d5f75230997e3080f6338fac631-waptia.jpg
(Click for larger image)

Waptia-like arthropod, Lower Cambrian, Haikou, Yunnan. (A) Individual with twisted abdomen, part of chain, Yunnan Key Laboratory for Palaeontology, YKLP 11020a. (B) Chain, about 20 individuals, various dorsoventral-lateral orientations, composite image (joined at cpt/p arrow), YKLP 11020a and YKLP 11020b. (C) Individual linked to carapace behind, lateral view, part of chain of nine individuals, YKLP 11021. (D) Isolated individual, subventral view, YKLP 11019. (E to G) Reconstruction shown in dorsal, ventral, and right lateral views, respectively. Scale bars in (A), (C), and (D) indicate 1 mm; in (B) and (E) to (G), 5 mm. b, s, and t indicate bent, stretched, and telescoped individuals, respectively; cpt, counterpart; f, facing direction; p, part; and tw, twisted.

They do not look like animals that were constrained in a burrow, or that were crawling over the surface. Rather, they had been swimming together in a chain at death, and the whole chain fell to the sea bed, bending and kinking but still remaining firmly locked together.

Why were they doing this? My first thought was of sex; everyone knows how dragonflies and damselflies lock together for mating, but of course that would predict pairs of individuals, not 20 at a time. It also reminded me of the Drosophila mutant fruitless, in which male flies court other male flies, and they spontaneously form conga lines in the culture bottles. That’s also unlikely, since that kind of behavior doesn’t lead to a consistent pattern of successful reproduction, but maybe if these animals were hermaphroditic, it might work. It’s not a behavior that any modern arthropods show, however.

The authors consider the possibility it is a feeding strategy, but that’s even worse: they’re locked basically mouth to anus, which would mean the fellow at the end of the line gets a very unpleasant diet. They conclude that the most likely explanation is that this represents a migratory behavior, perhaps involved in daily vertical migration. It may have been that strings of these animals would link up and paddle together to move to new feeding sites, where they separated and dispersed until the time came to move elsewhere.


Hou X-G, Siveter DJ, Aldridge RJ, Siveter DJ (2008) Collective Behavior in an Early Cambrian Arthropod. Science 322(5899):224.

Please stop. You’re driving me insane!

DO NOT SEND ME ANY MORE REQUESTS TO CRASH THE PBS POLL ON SARAH PALIN. I am receiving over 50 email requests per day to do it, and there are a dozen comments every day mentioning it. You don’t see them because I’ve had to specifically add a filter to trash them automatically, and similarly, I’ve got an email filter that is killing all the messages direct to me. I know, the stupid poll has gone viral and there is email circulating all over the web asking people to vote on it, and everyone who sees it forwards it on to me, for some reason. It’s been done. It is a thoroughly hacked poll already. Please read my previous plea, This poll is an ex-poll, OK?.

At this rate, I might just have to put up a permanent, big, bold banner across the top of Pharyngula that tells people to throw that email about the PBS poll away.

Whoa. Hitchens endorses Obama!

On politics, Hitchens and I rarely agree…but this time he and I are singing in harmony. Obama is not a perfect candidate by any means, but McCain/Palin are a national disgrace, and there’s only one way rational people can vote.

It therefore seems to me that the Republican Party has invited not just defeat but discredit this year, and that both its nominees for the highest offices in the land should be decisively repudiated, along with any senators, congressmen, and governors who endorse them.

Throw all the rascals out, but be prepared to have to work hard to prod the Democrats into doing anything constructive with a majority.

VenomFangX vs. Thunderf00t

Ah, the weird, wild world of the interwebs, where one actually finds people calling themselves “VenomFangX” and “Thunderf00t” squaring off to do battle. VenomFangX is one of the lower denizens of Youtube, a creationist notorious for the arrogant confidence with which he states the ridiculous and ignorant. Thunderf00t is a calm rationalist and defender of science and evolution on Youtube, and they recently did battle.

VenomFangX, unable to actually outargue and outreason Thunderf00t, made a series of legal accusations, that Thunderf00t was violating copyright, and convinced Youtube to briefly yank his account. Thunderf00t shot those accusations down, and made a legal claim in reply, that abusing the copyright act had serious penalties associated with it, and demanded a public retraction and apology.

Thunderf00t won, and got VenomFangX to concede and read a detailed apology on camera, which is now on Youtube. I have to give it to VenomFangX, he actually managed to read it with a little dignity and about the same amount of sincerity you’ll find in his creationist videos — but I doubt that he has really learned anything from the episode, other than to be more careful about making actionable statements.

The 2008 IgNobels

Browse the IgNobel Awards and find your favorites. I rather liked the idea of ovulatory status affecting the earnings of lap dancers (although I’d like to know more about other factors that might influence performance), but the best was the title of the paper that won the literature prize: “You Bastard: A Narrative Exploration of the Experience of Indignation within Organizations.”