Curiosity landing

The Mars explorer named Curiosity was launched successfully on Saturday and is expected to land on the planet on August 6, 2012. Because Curiosity is a much larger object than previous explorers, engineers needed to develop a new way of giving it a soft landing and this new technique is causing some anxiety to mission scientists about whether the rover can survive the landing. Some of them refer to the final stages of the landing as ‘six minutes of terror’.

You can see an animation (made back in 2005) of what the landing should look like.

Here is a test run of the final stage done in the laboratory.

Relativity-14: Revised OPERA experiment finds same result

The OPERA experiment that caused such a flurry of interest with its reports of faster-than-light neutrinos has been repeated to take into account one of the criticisms and they find that the neutrinos still seem to be traveling faster than the speed of light. You can read the paper on the revised experiment here. (For previous posts in this topic, see sere.)

In the earlier experiments, the neutrinos were sent in clusters that spanned 10 microseconds, much longer than the 60 nanoseconds time difference that signaled the faster-than-light effect, and thus the experimenters had to do some fancy statistical analyses to extract the time of flight of each neutrino. Some skeptics had suggested that those statistical analyses were flawed. The new experiment has clusters that last only 3 nanoseconds, thus ruling out that particular source of systematic error.

The other potential sources of error will take longer to check out.

Where does our morality come from?

For reasons that are not clear to me, some religious people seem to think that the moral sense that we possess is evidence for god. In fact, some of them (such as Francis Collins in his book The Language of God) go so far as to claim that this is a really powerful argument for god. They point to the fact that there are quite a few moral impulses that seem to be universal and claim that this must mean that they were implanted in us by god.

This is a specious argument. In my series of posts on the biological basis for justice and altruism (part 1, part 2, part 3, and part 4), I discussed how our ideas of justice and our altruistic impulses can be traced to biological origins. What science is making abundantly clear is that the foundation of our moral senses also are evolutionary in origin and that culture builds on those basic biological impulses to create moral system of increasing generality.

Paul Bloom has studied this question by looking at what we can learn about the moral thinking of babies and in his article The Moral Life of Babies in the New York Times issue on May 5, 2010 writes:
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General relativity versus modified Newton theories of gravity

In the case of the large-scale structure of the universe, the dominant paradigm is that the dynamics of the universe are governed by the theory of general relativity, augmented by the postulation of the existence of dark matter and dark energy. Classical Newtonian theory of gravity was not believed to hold, because it could not explain many features of galaxies.

But in science, one can always come up with alternative theories to the dominant paradigm to explain any phenomenon and there have been efforts to develop what are known as MOND theories (standing for MOdified Newtonian Dynamics) to explain the properties of the universe that would dispense with general relativity and revert to Newtonian gravity with slight modifications. Via blog reader Hunter, I came across this article that says that they have tested one form of the MOND hypothesis and found that it cannot explain the measured gravitational redshift of galaxy clusters, while general relativity and dark matter can.

This does not definitely rule out MOND theories since any theory can always be tweaked to accommodate any experimental result. But such negative results do make them less plausible to scientists.

Relativity-13: Some concluding thoughts

(For previous posts in this series, see here.)

A lot of things need to happen before the extraordinary claims of faster-than-light neutrinos are accepted as true. As Carl Sagan once said, “Extraordinary claims require extraordinary evidence.” The required evidence needs to take many forms: the results should be consistent and reproducible, corroborating evidence will have to be found, consistency with other phenomena will have to established, and alternative explanations for the phenomenon based on traditional physics will have to be ruled out. All this is going to take some time.

But if the result seems to hold up, even then it is not usually the case that scientists completely discard a highly respected old theory and start from scratch. While a few bolder scientists may take this opportunity to try and create a completely new theory, the majority of them usually seek to find minimal changes in the existing theory that would accommodate the new result.

As physicist Heinrich Pas says:

Even if true, this result neither proves Einstein wrong nor implies that causality has to be violated and time travel is possible. Things can move faster than the speed of light without violating Einstein if either the speed of light is not the limiting velocity as one can observe it for light propagation in media such as, for example, water. This can be modeled with background fields in the vacuum as has been proposed by [Indiana University physicist] Alan Kostelecky.

Or spacetime could be warped in a way so that neutrinos can take a shortcut without really being faster than the speed of light. As our three space plus one time dimensions look pretty flat, this would require an extra dimension (as proposed by [University of Hawaii at Manoa physicist] Sandip Pakvasa, [Vanderbilt University physicist] Tom Weiler and myself).

It was Einstein who suggested in 1905 that there is a limiting speed in nature and that this is the speed of light in a vacuum. I have already discussed in connection with Cherenkov radiation that when traveling in a medium such as water or glass or even air, the speed of light is reduced and it is possible to have other particles travel at speeds greater than light in that medium.

So one possible explanation for the OPERA neutrino results is to decouple the speed of light with the limiting speed. Perhaps what we call the vacuum has properties that slows down light from this potentially larger limiting value, and that this new upper limit is what should appear in the theory of relativity. If so, then having neutrinos travel faster than the speed of light in the vacuum would simply mean that neutrinos are slowed down less than light by the vacuum, similar to what happens in other media like the Sun or water or glass. This would require some additional adjustments to theory. Einstein said that the limiting speed must be an invariant for all observers and equated this limiting speed to the speed of light because it overcame some problems of consistency with Maxwell’s electromagnetic theory. Decoupling those two speeds may require us to refine Maxwell’s laws as well, at the very minimum. As is well known, there is no free lunch in science. You cannot make changes in one scientific theory without having to make adjustments in other theories so that they all fit together again.

This series has tried to explain why the proper scientific response to reports of a major discovery is skepticism. This should not be equated with dogmatic obstructionism because in the case of dogma, one starts with a belief that cannot be changed whatever the evidence. Skepticism, on the other hard, is merely resistance that can be overcome with sufficient evidence and reason.

Major theories in science are rarely overthrown on the basis of a single experimental result, though textbooks sometimes tend to give that erroneous image of scientific progress. Usually what happens when a surprising result crops up is that a few people start to look at it closely to see if the results can be replicated by other people in different contexts, and if the ancillary consequences of the new result are also seen.

If none of these pans out, then the original result is deemed to be due to an error (usually a subtle one in the case of careful scientists) or to some factor that was overlooked in the data collection or analysis. The latter is often referred to as a systematic error and is more common because it is hard to be sure that you have accounted for all the possible factors that can influence an experiment, especially if you are working at the frontiers of knowledge, pushing the limits. Sometimes, as in the case of cold fusion, an adequate explanation of the phenomenon within the standard framework is not discovered for a long time and a few scientists believe they do have a new effect and continue to work on it. Such theories die only when their advocates die out.

I doubt that the faster-than-light neutrino story will remain similarly ambiguous for too long but it is a difficult experiment and so may take years to sort out. The quickest resolution to such controversies is when the original experimenters find some error that causes them to withdraw their claim. The OPERA team already has plans to repeat the neutrino experiment with modifications designed to address at least a few of the concerns expressed so far. Another group known as MINOS also plans to repeat the experiment but at locations in the US, with neutrinos produced at Fermilab near Chicago and detectors in northern Minnesota or even South Dakota, the latter being a longer distance than that between CERN and Gran Sasso,

Whatever the final outcome, the faster-than-light neutrino reports have shone a light onto how science really works and that is always a good thing.

Just for the fun, I am ending this series with a word cloud made out of this series of posts. (Ignore the href and em items since these are merely html tags and have nothing to do with the content.)
word cloud.jpg

Relativity-12: David Hume and causality

(For previous posts in this series, see here.)

Suppose that the claim that neutrinos can travel faster than light holds up. What are the implications?

As I said earlier in the series, this does not mean that Einstein’s theory of relativity is overthrown, since it always allowed for faster than light particles, though we had never observed them. But it does mean that Einstein causality, the idea that if two events are causally connected by a signal that travels from one event to the other, then all observers’ clocks will agree that the signal left the source before it arrived at the other end, will have to go.
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Relativity-11: The cold fusion debacle

(For previous posts in this series, see here.)

The ‘cold fusion’ episode from back in 1989 illustrates the danger with issuing press releases announcing a major scientific discovery before the scientific community has had a chance to weigh in and sift through the evidence. Two respected scientists Stanley Pons and Martin Fleischmann at the University of Utah discovered reactions producing enormous amounts of heat when the metal palladium was immersed in what is known as ‘heavy water’, which contains a large fraction of water molecules in which the ordinary hydrogen atom has been replaced by the heavier isotope deuterium. The experimenters thought that chemical reactions could not account for the scale of the energy release and were convinced that they had discovered a way to produce nuclear fusion reactions at room temperature, thus opening the way to a vast, cheap, and clean new energy source. Needless to say, this would be a revolutionary discovery, both scientifically and practically.

In March 1989 they announced their results at a press conference to loud fanfare. I remember hearing the announcement on BBC news over my short-wave radio and thinking “Wow! This is huge.” As in the current case of faster-than-light neutrinos, the initial surprise was quickly followed by considerable skepticism within the scientific community because cold fusion went completely against all that we thought we knew about nuclear fusion. For two nuclei to come close enough to fuse, they have to overcome the strong repulsive forces due to both having positive charges. For the nuclei to overcome this ‘Coulomb barrier’, they have to have high energies that are associated with high temperatures as found in the Sun and other stars, which is what enables fusion to be their energy source. What Pons and Fleischmann were suggesting would require some new mechanism to overcome the well-known and well-understood obstacles to low-temperature fusion.

Other scientists pointed out that even if we ignored the Coulomb problem, the byproducts of fusion, which should have been copiously produced, were not observed either, throwing doubt on whether fusion was actually occurring. This objection was countered by claiming that perhaps this was a new form of nuclear reaction that did not produce those specific byproducts. As I pointed out in my series on the logic of science, almost any theory can be salvaged by the introduction of such auxiliary hypotheses. But adopting such stratagems tends to weaken the case for a new theory unless they too can be corroborated with other evidence.

If the claims of Pons and Fleischmann were true, the practical benefits and the revolutionary science they spawned were enormous and this persuaded enough scientists to take the cold fusion claims seriously enough to spend considerable time and effort and money to investigate them. As far as I am aware, over two decades later, though some scientists still continue to work on it, there is still no consistency about the cold fusion reactions, despite periodic resurgences of enthusiasm, enough that the Pentagon is funding further studies. In 2009, the program 60 Minutes did a program giving the history of cold fusion and some new developments.

One problem with cold fusion is that the heat reactions cannot be reliably reproduced. “The experiments produce excess heat at best 70 percent of the time; it can take days or weeks for the excess heat to show up. And it’s never the same amount of energy twice.” This is always a troubling sign. Scientific laws are not idiosyncratic. If they work, they should work all the time in the same way with no exceptions. If there are exceptions, these should also be law-like in that you should be able to predict exactly under what conditions they will or will not occur. Results that occur sometimes with no understanding why are signs that there are some unknown factors at work that are skewing the results.

So what has all this history to do with the recent neutrino story? The fact that this result was also announced via what was essentially a press release and not at a scientific meeting or in a peer-reviewed journal article aroused some concern. Press releases do not face the same degree of scrutiny as a journal article, where a sensational claim of this sort would be subject to close scrutiny before being approved for publication. In the above video, Fleischmann recognized this mistake, saying that he had two regrets: “calling the nuclear effect “fusion,” a name coined by a competitor, and having that news conference, something he says the University of Utah wanted.”

It is not the case that scientists are hidebound dogmatists, determined to cling on to old ideas, as is sometimes claimed by non-scientists when their pet theories (such as intelligent design) are rejected. As I said before, part of the strength of science is that because scientific knowledge is the product of a consensus-building process, it does not get easily swayed by each and every claim of a big discovery. It initially views reports of revolutionary developments with skepticism, waiting to see if the results hold up and corroborating evidence is produced. If so, the community can and does accept the new idea. For example, this year’s award of the Nobel prize for physics was for the discovery that distant galaxies are not only moving away from us (which agreed with existing theories) but are actually accelerating (which flatly contradicted everything we had thought and has led to the highly counter-intuitive idea of so-called ‘dark energy’ permeating and dominating all of space) shows that the community can change its collective mind and accept radically new ideas, and fairly quickly. But the reason such a seemingly outlandish result as dark energy became the conventional wisdom within the short space of less than two decades is because the proponents were able to marshal the evidence in favor of it that survived close scrutiny and was corroborated.

The history of cold fusion, despite not becoming mainstream, also puts the lie to the claims of the so-called intelligent design movement that scientists conspire to suppress those ideas that challenge conventional wisdom. Despite the fact that most of the scientific community is highly skeptical of it being a real effect, cold fusion advocates actually do have a research program in which they do experiments, produce data, and publicize their results. All that members of the intelligent design community do is write books and articles and give talks whining that the scientific community refuses to give them a platform to promote their ideas and that this is because the community is hidebound and refuses to even consider their bold new idea that challenges the accepted ‘dogma’ of evolution.

The actual explanation for why the scientific community rejects intelligent design is simple and mundane. More that two decades after the idea was first proposed, intelligent design advocates still have not done a single experiment or have even a research program to do any.

Next: What if Einstein causality has to be abandoned?

Relativity-10: Science and public relations

(For previous posts in this series, see here.)

Scientists want their work to influence the field and so they would like it to gain the widest possible audience. Most of the time, their peers (and funding agencies) are their target audience because they are the only ones who really understand what they do. But when the work also has appeal to the general public because of its practical applicability or its revolutionary implications, then there can arise tensions in how the work is publicized and in the case of the OPERA experiment on faster-than-light neutrinos, there has been considerable unease with how this whole episode was handled with respect to the media.

The usual process when scientists have something new to say is that they write up a paper with their results and send it to a journal. The journal then sends the paper to referees who work in the same field (the number of referees depends on the journal and the discretion of the editor) who provide feedback to the editor. The referees do not usually check the results or repeat the calculations and experiments. What they do is see if the paper makes sense, the methodology is correct, if the authors have taken into account all the relevant factors and provided all the necessary information so that readers know exactly what was done (and how) so that they could repeat and check the results if they are so inclined, and that proper credit has been given for prior related work. Based on this feedback, the editor decides whether to accept the paper, reject it, or send it back to the authors for revisions and/or additional work. Good referees and editors can improve a paper enormously by providing the authors with valuable feedback and useful information and suggestions.

In the sciences, authors also usually simultaneously send out copies of the paper (known as preprints) to colleagues in the field. This serves to give their colleagues advance notice of their work (since the time taken to appear in the journal can often take over a year), to get feedback, and to establish priority for any discovery. All this occurs out of the public eye. Once the paper has been accepted and published by a journal, then it enters the public discussion and the media can publicize it. If the paper has significant implications, the journals may alert the media and give reporters a copy of the paper before it appears in print so that they can research and prepare an article about it, but the reporter is under an embargo to not publish until the journal article actually appears. Some of the more influential journals will refuse to publish an article if the authors release the information to the media before the journal prints it.

In the pre-internet days, and for research results that do not have revolutionary implications, this system worked reasonably well. Due to the cost of mailing, not too many preprints went out so the pre-publication discussions remained within a fairly small circle. With the internet, it became much easier to send out preprints to huge numbers of people at no cost and it was not long before it was realized that it made sense to create a system that could serve as a permanent archive that would allow scientists to post their preprints online so that anyone could gain access to them and search for those results that interested them. Currently the most popular venue for such preprints is arXiv and Wikipedia has a good article about its history and how it works.

The articles that are found on arXiv are preprints and thus have not been peer-reviewed but the system is minimally moderated to keep out rubbish. In general, scientists are concerned about their reputations among their peers and so most are careful to only post articles that they think would meet the standards of quality required if they were submitting to a peer-reviewed journal. Almost all of them do simultaneously submit their articles to such journals. As a result, the papers that appear on arXiv tend to be of pretty good quality. All the papers associated with the faster-than-light OPERA experiment are on arXiv.

A few scientists feel that peer-reviewed print journals are an anachronism and do not bother to try to even get their work into journals, feeling that the quality of the work will speak for itself. They think that if their work is correct and important, the community of scientists will accept it and build on it, while if it is wrong the community will criticize and reject it. Possibly the worst fate is that the community will think it is useless and a waste of time and completely ignore it. It may well be the case that in the future, expensive peer-reviewed print journals will disappear and that this kind of open-source publication will become the norm, with quality being determined by the consensus judgment of the scientific community. We are not there yet.

In the case of the OPERA experiment, the system broke down somewhat for several reasons. The OPERA experiment is very difficult and is a huge enterprise involving many collaborators and lasting over three years, with the paper having over 150 authors. Given the culture of the free sharing of information in science, it is very hard to keep preliminary results under wraps and it was pretty much an open secret that these faster-than-light results had been obtained. But this knowledge stayed within the community. What the OPERA team did was the day after they posted their preprint on arXiv on September 22, they issued a press release announcing their results and promoting a big press conference the next day with media and scientists present.

This rubbed some scientists the wrong way. Scientists can be as publicity hungry as celebrities but there are norms and there is a discreet way of making one’s name known. Holding press conferences or issuing press releases so early in the game, before the scientific community has had time to pass its verdict on the research, is considered bad form and the OPERA team has received some criticisms on this score.

While some of the carping may be due to jealousy, it is also the case that trumpeting that a scientific revolution has occurred can harm the image of science if the claim has to be later retracted. The reliable knowledge that science produces tends to be the consensus verdict of the community, achieved after a lot of behind-the-scenes work has smoothed out the rough edges and corrected mistakes. Bypassing that filtering process and going public too soon can lead to embarrassing reversals and give ammunition to the critics of science that its results cannot be trusted.

Next: Recalling an earlier public relations debacle

What use is half a wing?

Creationists like to challenge the theory of evolution by asking how it can be that things can evolve incrementally since in its early stages the new feature seems to lack its final functionality. They pose questions like “What is the use of half an eye or half a wing?” Of course, scientists have long explained this. They have shown how the eye could have evolved by tiny changes and in fact even right now almost the full spectrum of differential eye development can be seen in existing species.

They have also pointed out that it is a mistake to assume that the final functionality of a feature was the only functionality all along, and that features may have had other functions in the early stages and only later became adapted to its final use.

Carl Zimmer had a nice article earlier this year in National Geographic about the evidence that feathers might have evolved for a different purpose long before flight occurred. More recently, he reports on new research results that add to our knowledge of what purpose those non-flying feathers in primitive wing forms might have served.